Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.88■□□□□ 0.93
RXRBP28702 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RXRBP28702 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC20.88■□□□□ 0.93
RXRBP28702 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC20.88■□□□□ 0.93
RXRBP28702 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.88■□□□□ 0.93
RXRBP28702 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC20.88■□□□□ 0.93
RXRBP28702 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.88■□□□□ 0.93
RXRBP28702 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC20.88■□□□□ 0.93
RXRBP28702 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC20.88■□□□□ 0.93
RXRBP28702 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.88■□□□□ 0.93
RXRBP28702 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.88■□□□□ 0.93
RXRBP28702 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.88■□□□□ 0.93
RXRBP28702 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.88■□□□□ 0.93
RXRBP28702 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RXRBP28702 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
RXRBP28702 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RXRBP28702 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.87■□□□□ 0.93
RXRBP28702 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RXRBP28702 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.87■□□□□ 0.93
RXRBP28702 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.87■□□□□ 0.93
RXRBP28702 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RXRBP28702 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RXRBP28702 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.87■□□□□ 0.93
RXRBP28702 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC20.87■□□□□ 0.93
RXRBP28702 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.87■□□□□ 0.93
RXRBP28702 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC20.87■□□□□ 0.93
RXRBP28702 CMC1-204ENST00000423894 549 ntTSL 2 BASIC20.87■□□□□ 0.93
RXRBP28702 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC20.87■□□□□ 0.93
RXRBP28702 AC006335.1-201ENST00000445200 547 ntBASIC20.87■□□□□ 0.93
RXRBP28702 SLED1-202ENST00000512051 380 ntBASIC20.87■□□□□ 0.93
RXRBP28702 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC20.87■□□□□ 0.93
RXRBP28702 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC20.87■□□□□ 0.93
RXRBP28702 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RXRBP28702 AC000095.1-201ENST00000603208 874 ntBASIC20.87■□□□□ 0.93
RXRBP28702 AC012044.1-201ENST00000603431 297 ntBASIC20.87■□□□□ 0.93
RXRBP28702 AC127024.7-201ENST00000625101 200 ntBASIC20.87■□□□□ 0.93
RXRBP28702 AC006453.1-201ENST00000636037 1257 ntBASIC20.87■□□□□ 0.93
RXRBP28702 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RXRBP28702 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.87■□□□□ 0.93
RXRBP28702 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRBP28702 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC20.86■□□□□ 0.93
RXRBP28702 AC135050.7-201ENST00000624508 2218 ntBASIC20.86■□□□□ 0.93
RXRBP28702 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RXRBP28702 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRBP28702 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RXRBP28702 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.86■□□□□ 0.93
RXRBP28702 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRBP28702 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRBP28702 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RXRBP28702 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.86■□□□□ 0.93
RXRBP28702 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.86■□□□□ 0.93
RXRBP28702 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.86■□□□□ 0.93
RXRBP28702 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.86■□□□□ 0.93
RXRBP28702 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC20.86■□□□□ 0.93
RXRBP28702 AC005730.2-201ENST00000564549 1184 ntBASIC20.86■□□□□ 0.93
RXRBP28702 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC20.86■□□□□ 0.93
RXRBP28702 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC20.86■□□□□ 0.93
RXRBP28702 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC20.86■□□□□ 0.93
RXRBP28702 AC020922.3-201ENST00000595064 547 ntBASIC20.86■□□□□ 0.93
RXRBP28702 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.86■□□□□ 0.93
RXRBP28702 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRBP28702 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RXRBP28702 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRBP28702 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RXRBP28702 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.86■□□□□ 0.93
RXRBP28702 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.86■□□□□ 0.93
RXRBP28702 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RXRBP28702 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.85■□□□□ 0.93
RXRBP28702 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC20.85■□□□□ 0.93
RXRBP28702 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms