Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
RAB4AP20338 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RAB4AP20338 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB4AP20338 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RAB4AP20338 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
RAB4AP20338 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RAB4AP20338 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB4AP20338 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RAB4AP20338 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RAB4AP20338 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.56□□□□□ -0.4
RAB4AP20338 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RAB4AP20338 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 AC009154.2-201ENST00000621177 724 ntBASIC12.56□□□□□ -0.4
RAB4AP20338 FAM197Y4-202ENST00000622692 608 ntBASIC12.56□□□□□ -0.4
RAB4AP20338 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 KRT89P-201ENST00000620027 1478 ntBASIC12.56□□□□□ -0.4
RAB4AP20338 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB4AP20338 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB4AP20338 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB4AP20338 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB4AP20338 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB4AP20338 FP325330.2-201ENST00000624219 5630 ntBASIC12.56□□□□□ -0.4
RAB4AP20338 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB4AP20338 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB4AP20338 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB4AP20338 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
RAB4AP20338 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RAB4AP20338 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RAB4AP20338 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RAB4AP20338 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB4AP20338 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RAB4AP20338 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RAB4AP20338 PPT1-215ENST00000641471 2368 ntBASIC12.55□□□□□ -0.4
RAB4AP20338 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RAB4AP20338 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms