Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PRKCAP17252 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 MIR940-201ENST00000401276 94 ntBASIC15.17■□□□□ 0.02
PRKCAP17252 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.17■□□□□ 0.02
PRKCAP17252 AP000347.1-202ENST00000435868 847 ntBASIC15.17■□□□□ 0.02
PRKCAP17252 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.17■□□□□ 0.02
PRKCAP17252 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PRKCAP17252 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.17■□□□□ 0.02
PRKCAP17252 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.17■□□□□ 0.02
PRKCAP17252 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 FAM45BP-202ENST00000592932 1624 ntBASIC15.17■□□□□ 0.02
PRKCAP17252 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PRKCAP17252 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.17■□□□□ 0.02
PRKCAP17252 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PRKCAP17252 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.16■□□□□ 0.02
PRKCAP17252 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PRKCAP17252 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PRKCAP17252 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.16■□□□□ 0.02
PRKCAP17252 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PRKCAP17252 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.16■□□□□ 0.02
PRKCAP17252 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.16■□□□□ 0.02
PRKCAP17252 RNU1-129P-201ENST00000384064 167 ntBASIC15.16■□□□□ 0.02
PRKCAP17252 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.16■□□□□ 0.02
PRKCAP17252 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.16■□□□□ 0.02
PRKCAP17252 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PRKCAP17252 U1.21-201ENST00000580816 167 ntBASIC15.16■□□□□ 0.02
PRKCAP17252 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.16■□□□□ 0.02
PRKCAP17252 AL671883.3-201ENST00000603274 991 ntBASIC15.16■□□□□ 0.02
PRKCAP17252 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.16■□□□□ 0.02
PRKCAP17252 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.16■□□□□ 0.02
PRKCAP17252 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PRKCAP17252 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.16■□□□□ 0.02
PRKCAP17252 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.16■□□□□ 0.02
PRKCAP17252 AL512652.2-201ENST00000625156 1716 ntBASIC15.16■□□□□ 0.02
PRKCAP17252 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PRKCAP17252 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
PRKCAP17252 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.16■□□□□ 0.02
PRKCAP17252 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.16■□□□□ 0.02
PRKCAP17252 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
PRKCAP17252 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
PRKCAP17252 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRKCAP17252 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 FLJ16779-201ENST00000612722 7638 ntBASIC15.15■□□□□ 0.02
PRKCAP17252 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PRKCAP17252 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.15■□□□□ 0.02
PRKCAP17252 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
PRKCAP17252 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PRKCAP17252 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.15■□□□□ 0.02
PRKCAP17252 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PRKCAP17252 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.15■□□□□ 0.02
PRKCAP17252 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms