Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
NCK1P16333 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NCK1P16333 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
NCK1P16333 AC092919.2-201ENST00000623631 1645 ntBASIC15.46■□□□□ 0.07
NCK1P16333 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.46■□□□□ 0.07
NCK1P16333 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
NCK1P16333 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.46■□□□□ 0.07
NCK1P16333 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NCK1P16333 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NCK1P16333 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.46■□□□□ 0.07
NCK1P16333 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
NCK1P16333 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.46■□□□□ 0.07
NCK1P16333 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.46■□□□□ 0.07
NCK1P16333 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.46■□□□□ 0.07
NCK1P16333 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.46■□□□□ 0.07
NCK1P16333 AC107918.2-201ENST00000530817 355 ntBASIC15.46■□□□□ 0.07
NCK1P16333 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.46■□□□□ 0.07
NCK1P16333 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
NCK1P16333 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.46■□□□□ 0.07
NCK1P16333 AC138894.3-201ENST00000603787 634 ntBASIC15.46■□□□□ 0.07
NCK1P16333 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 AL589182.2-201ENST00000619332 1049 ntBASIC15.46■□□□□ 0.07
NCK1P16333 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.46■□□□□ 0.07
NCK1P16333 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.46■□□□□ 0.07
NCK1P16333 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.46■□□□□ 0.07
NCK1P16333 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.46■□□□□ 0.07
NCK1P16333 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCK1P16333 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.46■□□□□ 0.07
NCK1P16333 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCK1P16333 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCK1P16333 CICP13-201ENST00000422015 2789 ntBASIC15.46■□□□□ 0.06
NCK1P16333 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCK1P16333 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCK1P16333 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.46■□□□□ 0.06
NCK1P16333 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCK1P16333 AL353732.1-201ENST00000569618 1459 ntBASIC15.46■□□□□ 0.06
NCK1P16333 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.46■□□□□ 0.06
NCK1P16333 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.46■□□□□ 0.06
NCK1P16333 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.46■□□□□ 0.06
NCK1P16333 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 AC067930.6-201ENST00000623257 4947 ntBASIC15.45■□□□□ 0.06
NCK1P16333 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.45■□□□□ 0.06
NCK1P16333 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
NCK1P16333 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
NCK1P16333 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NCK1P16333 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.45■□□□□ 0.06
NCK1P16333 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.45■□□□□ 0.06
NCK1P16333 AC087641.1-201ENST00000557561 1021 ntBASIC15.45■□□□□ 0.06
NCK1P16333 AC020765.3-201ENST00000613051 740 ntBASIC15.45■□□□□ 0.06
NCK1P16333 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.45■□□□□ 0.06
NCK1P16333 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.45■□□□□ 0.06
NCK1P16333 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NCK1P16333 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NCK1P16333 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.45■□□□□ 0.06
NCK1P16333 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NCK1P16333 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.45■□□□□ 0.06
NCK1P16333 AC006486.2-201ENST00000624246 2199 ntBASIC15.45■□□□□ 0.06
NCK1P16333 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.45■□□□□ 0.06
NCK1P16333 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCK1P16333 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCK1P16333 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NCK1P16333 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NCK1P16333 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NCK1P16333 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NCK1P16333 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
NCK1P16333 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
NCK1P16333 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
NCK1P16333 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCK1P16333 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.44■□□□□ 0.06
NCK1P16333 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCK1P16333 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.44■□□□□ 0.06
NCK1P16333 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.44■□□□□ 0.06
NCK1P16333 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.44■□□□□ 0.06
NCK1P16333 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms