Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.84■□□□□ 0.29
BRAFP15056 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.84■□□□□ 0.29
BRAFP15056 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BRAFP15056 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BRAFP15056 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
BRAFP15056 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.84■□□□□ 0.29
BRAFP15056 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BRAFP15056 AC013268.4-201ENST00000637413 2228 ntBASIC16.84■□□□□ 0.29
BRAFP15056 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRAFP15056 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
BRAFP15056 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
BRAFP15056 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
BRAFP15056 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
BRAFP15056 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
BRAFP15056 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
BRAFP15056 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.83■□□□□ 0.28
BRAFP15056 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BRAFP15056 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.83■□□□□ 0.28
BRAFP15056 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.83■□□□□ 0.28
BRAFP15056 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BRAFP15056 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.83■□□□□ 0.28
BRAFP15056 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 AC108073.2-201ENST00000464002 357 ntBASIC16.83■□□□□ 0.28
BRAFP15056 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.83■□□□□ 0.28
BRAFP15056 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
BRAFP15056 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.83■□□□□ 0.28
BRAFP15056 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
BRAFP15056 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
BRAFP15056 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.83■□□□□ 0.28
BRAFP15056 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BRAFP15056 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.83■□□□□ 0.28
BRAFP15056 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.83■□□□□ 0.28
BRAFP15056 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.83■□□□□ 0.28
BRAFP15056 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.83■□□□□ 0.28
BRAFP15056 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.83■□□□□ 0.28
BRAFP15056 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.83■□□□□ 0.28
BRAFP15056 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 PRAL-201ENST00000624952 3286 ntBASIC16.83■□□□□ 0.28
BRAFP15056 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRAFP15056 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRAFP15056 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.82■□□□□ 0.28
BRAFP15056 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRAFP15056 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRAFP15056 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.82■□□□□ 0.28
BRAFP15056 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.82■□□□□ 0.28
BRAFP15056 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BRAFP15056 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRAFP15056 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BRAFP15056 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRAFP15056 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRAFP15056 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.82■□□□□ 0.28
BRAFP15056 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRAFP15056 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.82■□□□□ 0.28
BRAFP15056 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRAFP15056 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.82■□□□□ 0.28
BRAFP15056 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRAFP15056 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BRAFP15056 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRAFP15056 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRAFP15056 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.82■□□□□ 0.28
BRAFP15056 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms