Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCL4P13236 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCL4P13236 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL4P13236 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.28■□□□□ 0.04
CCL4P13236 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CCL4P13236 CLK3P2-201ENST00000427566 1453 ntBASIC15.27■□□□□ 0.04
CCL4P13236 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL4P13236 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.27■□□□□ 0.04
CCL4P13236 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 AC005332.8-201ENST00000622750 2735 ntBASIC15.27■□□□□ 0.04
CCL4P13236 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CCL4P13236 LETM1P2-201ENST00000597330 2178 ntBASIC15.27■□□□□ 0.04
CCL4P13236 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.27■□□□□ 0.04
CCL4P13236 RPS2P32-201ENST00000439199 892 ntBASIC15.27■□□□□ 0.04
CCL4P13236 AC022210.1-201ENST00000449856 793 ntBASIC15.27■□□□□ 0.04
CCL4P13236 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.27■□□□□ 0.04
CCL4P13236 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.27■□□□□ 0.04
CCL4P13236 RRP7BP-205ENST00000566851 833 ntBASIC15.27■□□□□ 0.04
CCL4P13236 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.27■□□□□ 0.04
CCL4P13236 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL4P13236 TMEM261P1-201ENST00000604899 340 ntBASIC15.27■□□□□ 0.04
CCL4P13236 AL512343.1-201ENST00000605837 169 ntBASIC15.27■□□□□ 0.04
CCL4P13236 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL4P13236 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCL4P13236 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.27■□□□□ 0.03
CCL4P13236 AC009053.2-201ENST00000563701 2365 ntBASIC15.27■□□□□ 0.03
CCL4P13236 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCL4P13236 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CCL4P13236 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.27■□□□□ 0.03
CCL4P13236 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL4P13236 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.27■□□□□ 0.03
CCL4P13236 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.27■□□□□ 0.03
CCL4P13236 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL4P13236 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCL4P13236 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.27■□□□□ 0.03
CCL4P13236 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.27■□□□□ 0.03
CCL4P13236 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.27■□□□□ 0.03
CCL4P13236 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.27■□□□□ 0.03
CCL4P13236 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL4P13236 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCL4P13236 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL4P13236 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL4P13236 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL4P13236 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCL4P13236 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL4P13236 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.26■□□□□ 0.03
CCL4P13236 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCL4P13236 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL4P13236 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.26■□□□□ 0.03
CCL4P13236 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL4P13236 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.26■□□□□ 0.03
CCL4P13236 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.26■□□□□ 0.03
CCL4P13236 RARRES2P5-201ENST00000564013 466 ntBASIC15.26■□□□□ 0.03
CCL4P13236 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.26■□□□□ 0.03
CCL4P13236 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
CCL4P13236 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.26■□□□□ 0.03
CCL4P13236 LINC01115-203ENST00000606068 577 ntBASIC15.26■□□□□ 0.03
CCL4P13236 AL033527.5-201ENST00000641382 801 ntBASIC15.26■□□□□ 0.03
CCL4P13236 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CCL4P13236 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL4P13236 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CCL4P13236 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CCL4P13236 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
CCL4P13236 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms