Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
BCKDHAP12694 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.59■□□□□ 0.09
BCKDHAP12694 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.59■□□□□ 0.09
BCKDHAP12694 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.59■□□□□ 0.09
BCKDHAP12694 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
BCKDHAP12694 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
BCKDHAP12694 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.59■□□□□ 0.09
BCKDHAP12694 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
BCKDHAP12694 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.59■□□□□ 0.09
BCKDHAP12694 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
BCKDHAP12694 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.59■□□□□ 0.09
BCKDHAP12694 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.59■□□□□ 0.09
BCKDHAP12694 AC092474.2-201ENST00000424288 719 ntBASIC15.59■□□□□ 0.09
BCKDHAP12694 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.59■□□□□ 0.09
BCKDHAP12694 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.59■□□□□ 0.09
BCKDHAP12694 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.59■□□□□ 0.09
BCKDHAP12694 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
BCKDHAP12694 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.59■□□□□ 0.09
BCKDHAP12694 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.59■□□□□ 0.09
BCKDHAP12694 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.59■□□□□ 0.09
BCKDHAP12694 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
BCKDHAP12694 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.59■□□□□ 0.09
BCKDHAP12694 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
BCKDHAP12694 AC016027.1-202ENST00000607927 1699 ntBASIC15.59■□□□□ 0.09
BCKDHAP12694 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
BCKDHAP12694 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.59■□□□□ 0.09
BCKDHAP12694 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.59■□□□□ 0.09
BCKDHAP12694 AC104640.1-201ENST00000562617 2109 ntBASIC15.59■□□□□ 0.09
BCKDHAP12694 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.59■□□□□ 0.09
BCKDHAP12694 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.59■□□□□ 0.09
BCKDHAP12694 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 AL596257.1-201ENST00000641463 2694 ntBASIC15.59■□□□□ 0.09
BCKDHAP12694 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BCKDHAP12694 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.58■□□□□ 0.09
BCKDHAP12694 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
BCKDHAP12694 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
BCKDHAP12694 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
BCKDHAP12694 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BCKDHAP12694 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
BCKDHAP12694 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
BCKDHAP12694 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
BCKDHAP12694 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
BCKDHAP12694 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
BCKDHAP12694 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BCKDHAP12694 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BCKDHAP12694 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.58■□□□□ 0.08
BCKDHAP12694 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.58■□□□□ 0.08
BCKDHAP12694 KRT18P34-201ENST00000488218 1270 ntBASIC15.58■□□□□ 0.08
BCKDHAP12694 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.58■□□□□ 0.08
BCKDHAP12694 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.58■□□□□ 0.08
BCKDHAP12694 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.58■□□□□ 0.08
BCKDHAP12694 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.58■□□□□ 0.08
BCKDHAP12694 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.58■□□□□ 0.08
BCKDHAP12694 AC023141.13-201ENST00000604991 943 ntBASIC15.58■□□□□ 0.08
BCKDHAP12694 AL078644.1-201ENST00000609881 752 ntBASIC15.58■□□□□ 0.08
BCKDHAP12694 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.58■□□□□ 0.08
BCKDHAP12694 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.58■□□□□ 0.08
BCKDHAP12694 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.58■□□□□ 0.08
BCKDHAP12694 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BCKDHAP12694 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BCKDHAP12694 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.58■□□□□ 0.08
BCKDHAP12694 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.58■□□□□ 0.08
BCKDHAP12694 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
BCKDHAP12694 AP003680.1-201ENST00000598970 3660 ntBASIC15.58■□□□□ 0.08
BCKDHAP12694 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BCKDHAP12694 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BCKDHAP12694 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BCKDHAP12694 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BCKDHAP12694 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
BCKDHAP12694 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.58■□□□□ 0.08
BCKDHAP12694 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
BCKDHAP12694 AC126177.1-201ENST00000547829 2218 ntBASIC15.58■□□□□ 0.08
BCKDHAP12694 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
BCKDHAP12694 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms