Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 MIR648-201ENST00000385046 94 ntBASIC17.7■□□□□ 0.42
CCDC172P0C7W6 HMGA1P7-201ENST00000406908 502 ntBASIC17.7■□□□□ 0.42
CCDC172P0C7W6 CRYGEP-201ENST00000412192 528 ntBASIC17.7■□□□□ 0.42
CCDC172P0C7W6 AL031284.1-201ENST00000419297 478 ntBASIC17.7■□□□□ 0.42
CCDC172P0C7W6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 AL603832.2-201ENST00000566195 2125 ntBASIC17.69■□□□□ 0.42
CCDC172P0C7W6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 AL592424.1-201ENST00000563624 1536 ntBASIC17.69■□□□□ 0.42
CCDC172P0C7W6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 AC007950.2-201ENST00000615045 2347 ntBASIC17.69■□□□□ 0.42
CCDC172P0C7W6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 VN2R19P-201ENST00000442399 1052 ntBASIC17.69■□□□□ 0.42
CCDC172P0C7W6 AC079781.3-201ENST00000449110 356 ntBASIC17.69■□□□□ 0.42
CCDC172P0C7W6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC172P0C7W6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 AL450487.1-201ENST00000426799 995 ntBASIC17.68■□□□□ 0.42
CCDC172P0C7W6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC172P0C7W6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC172P0C7W6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC172P0C7W6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC172P0C7W6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC172P0C7W6 AL122018.1-201ENST00000446607 2310 ntBASIC17.67■□□□□ 0.42
CCDC172P0C7W6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC172P0C7W6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC172P0C7W6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms