Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SFTPBP07988 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.27□□□□□ -0.13
SFTPBP07988 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.27□□□□□ -0.13
SFTPBP07988 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.27□□□□□ -0.13
SFTPBP07988 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.27□□□□□ -0.13
SFTPBP07988 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
SFTPBP07988 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPBP07988 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SFTPBP07988 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPBP07988 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPBP07988 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SFTPBP07988 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.26□□□□□ -0.13
SFTPBP07988 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SFTPBP07988 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SFTPBP07988 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPBP07988 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 ELK2BP-201ENST00000415014 1224 ntBASIC14.26□□□□□ -0.13
SFTPBP07988 KRT18P27-201ENST00000427733 1299 ntBASIC14.26□□□□□ -0.13
SFTPBP07988 PMS2P1-201ENST00000431037 1228 ntBASIC14.26□□□□□ -0.13
SFTPBP07988 RNA5SP415-201ENST00000517246 115 ntBASIC14.26□□□□□ -0.13
SFTPBP07988 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPBP07988 MPDU1-223ENST00000582151 728 ntBASIC14.26□□□□□ -0.13
SFTPBP07988 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.26□□□□□ -0.13
SFTPBP07988 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SFTPBP07988 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.26□□□□□ -0.13
SFTPBP07988 REXO1L3P-201ENST00000622202 1288 ntBASIC14.26□□□□□ -0.13
SFTPBP07988 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.26□□□□□ -0.13
SFTPBP07988 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SFTPBP07988 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SFTPBP07988 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.26□□□□□ -0.13
SFTPBP07988 DBET-201ENST00000630918 3363 ntBASIC14.26□□□□□ -0.13
SFTPBP07988 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPBP07988 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPBP07988 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.25□□□□□ -0.13
SFTPBP07988 SBF1P1-201ENST00000444527 5631 ntBASIC14.25□□□□□ -0.13
SFTPBP07988 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.25□□□□□ -0.13
SFTPBP07988 ZNF259P1-201ENST00000407656 1365 ntBASIC14.25□□□□□ -0.13
SFTPBP07988 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.25□□□□□ -0.13
SFTPBP07988 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SFTPBP07988 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.25□□□□□ -0.13
SFTPBP07988 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.25□□□□□ -0.13
SFTPBP07988 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.25□□□□□ -0.13
SFTPBP07988 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.25□□□□□ -0.13
SFTPBP07988 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 POLD2P1-201ENST00000511220 997 ntBASIC14.25□□□□□ -0.13
SFTPBP07988 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.25□□□□□ -0.13
SFTPBP07988 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.25□□□□□ -0.13
SFTPBP07988 MIR4492-201ENST00000581627 80 ntBASIC14.25□□□□□ -0.13
SFTPBP07988 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SFTPBP07988 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
SFTPBP07988 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SFTPBP07988 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SFTPBP07988 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.25□□□□□ -0.13
SFTPBP07988 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.25□□□□□ -0.13
SFTPBP07988 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SFTPBP07988 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.25□□□□□ -0.13
SFTPBP07988 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SFTPBP07988 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms