Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.11■□□□□ 0.17
CAPN1P07384 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN1P07384 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CAPN1P07384 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN1P07384 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN1P07384 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.11■□□□□ 0.17
CAPN1P07384 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CAPN1P07384 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN1P07384 CEND1P1-201ENST00000451006 455 ntBASIC16.11■□□□□ 0.17
CAPN1P07384 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN1P07384 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CAPN1P07384 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 PCGF3-213ENST00000620529 1899 ntBASIC16.11■□□□□ 0.17
CAPN1P07384 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CAPN1P07384 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.11■□□□□ 0.17
CAPN1P07384 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN1P07384 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN1P07384 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CAPN1P07384 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CAPN1P07384 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CAPN1P07384 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CAPN1P07384 HCG4-201ENST00000418983 998 ntBASIC16.1■□□□□ 0.17
CAPN1P07384 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.1■□□□□ 0.17
CAPN1P07384 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.1■□□□□ 0.17
CAPN1P07384 FAM58CP-201ENST00000435741 640 ntBASIC16.1■□□□□ 0.17
CAPN1P07384 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.1■□□□□ 0.17
CAPN1P07384 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.1■□□□□ 0.17
CAPN1P07384 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN1P07384 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.1■□□□□ 0.17
CAPN1P07384 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CAPN1P07384 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
CAPN1P07384 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN1P07384 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN1P07384 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN1P07384 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN1P07384 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN1P07384 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN1P07384 AC006449.6-201ENST00000612330 2296 ntBASIC16.1■□□□□ 0.17
CAPN1P07384 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN1P07384 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CAPN1P07384 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.09■□□□□ 0.17
CAPN1P07384 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CAPN1P07384 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.09■□□□□ 0.17
CAPN1P07384 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
CAPN1P07384 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 PAUPAR-201ENST00000630360 2965 ntBASIC16.09■□□□□ 0.17
CAPN1P07384 AL365203.3-201ENST00000609742 2057 ntBASIC16.09■□□□□ 0.17
CAPN1P07384 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CAPN1P07384 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.09■□□□□ 0.17
CAPN1P07384 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.09■□□□□ 0.17
CAPN1P07384 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.09■□□□□ 0.17
CAPN1P07384 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CAPN1P07384 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.09■□□□□ 0.17
CAPN1P07384 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.09■□□□□ 0.17
CAPN1P07384 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.09■□□□□ 0.17
CAPN1P07384 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms