Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.3■□□□□ 0.04
PDGFAP04085 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PDGFAP04085 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PDGFAP04085 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PDGFAP04085 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.3■□□□□ 0.04
PDGFAP04085 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.3■□□□□ 0.04
PDGFAP04085 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.3■□□□□ 0.04
PDGFAP04085 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PDGFAP04085 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.3■□□□□ 0.04
PDGFAP04085 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.3■□□□□ 0.04
PDGFAP04085 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.3■□□□□ 0.04
PDGFAP04085 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.3■□□□□ 0.04
PDGFAP04085 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PDGFAP04085 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.3■□□□□ 0.04
PDGFAP04085 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.3■□□□□ 0.04
PDGFAP04085 MPDU1-223ENST00000582151 728 ntBASIC15.3■□□□□ 0.04
PDGFAP04085 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.3■□□□□ 0.04
PDGFAP04085 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PDGFAP04085 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.3■□□□□ 0.04
PDGFAP04085 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
PDGFAP04085 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
PDGFAP04085 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PDGFAP04085 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFAP04085 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.29■□□□□ 0.04
PDGFAP04085 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.29■□□□□ 0.04
PDGFAP04085 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PDGFAP04085 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.29■□□□□ 0.04
PDGFAP04085 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 LINC02228-204ENST00000642115 2962 ntBASIC15.29■□□□□ 0.04
PDGFAP04085 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
PDGFAP04085 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.29■□□□□ 0.04
PDGFAP04085 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.29■□□□□ 0.04
PDGFAP04085 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.29■□□□□ 0.04
PDGFAP04085 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PDGFAP04085 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.29■□□□□ 0.04
PDGFAP04085 AC007967.4-201ENST00000614700 386 ntBASIC15.29■□□□□ 0.04
PDGFAP04085 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PDGFAP04085 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PDGFAP04085 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PDGFAP04085 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.29■□□□□ 0.04
PDGFAP04085 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PDGFAP04085 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFAP04085 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
PDGFAP04085 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.28■□□□□ 0.04
PDGFAP04085 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 FOXO1B-201ENST00000504678 1527 ntBASIC15.28■□□□□ 0.04
PDGFAP04085 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.28■□□□□ 0.04
PDGFAP04085 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PDGFAP04085 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.28■□□□□ 0.04
PDGFAP04085 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms