Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGCRP04035 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGCRP04035 OR6D1P-202ENST00000641007 5290 ntBASIC18.24■□□□□ 0.51
HMGCRP04035 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HMGCRP04035 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCRP04035 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
HMGCRP04035 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCRP04035 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.24■□□□□ 0.51
HMGCRP04035 AC099548.2-209ENST00000480264 625 ntBASIC18.24■□□□□ 0.51
HMGCRP04035 TDH-203ENST00000531764 1110 ntBASIC18.24■□□□□ 0.51
HMGCRP04035 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCRP04035 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HMGCRP04035 AC133539.2-201ENST00000604757 467 ntBASIC18.24■□□□□ 0.51
HMGCRP04035 AL391069.4-201ENST00000609583 481 ntBASIC18.24■□□□□ 0.51
HMGCRP04035 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
HMGCRP04035 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCRP04035 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HMGCRP04035 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HMGCRP04035 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCRP04035 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HMGCRP04035 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 AL512652.2-201ENST00000625156 1716 ntBASIC18.23■□□□□ 0.51
HMGCRP04035 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCRP04035 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.23■□□□□ 0.51
HMGCRP04035 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HMGCRP04035 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCRP04035 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCRP04035 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.23■□□□□ 0.51
HMGCRP04035 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCRP04035 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.23■□□□□ 0.51
HMGCRP04035 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.23■□□□□ 0.51
HMGCRP04035 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.23■□□□□ 0.51
HMGCRP04035 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.23■□□□□ 0.51
HMGCRP04035 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.23■□□□□ 0.51
HMGCRP04035 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HMGCRP04035 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 AC092053.1-201ENST00000605787 1936 ntBASIC18.23■□□□□ 0.51
HMGCRP04035 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCRP04035 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
HMGCRP04035 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCRP04035 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HMGCRP04035 GPAA1P2-202ENST00000606848 1787 ntBASIC18.22■□□□□ 0.51
HMGCRP04035 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCRP04035 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCRP04035 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCRP04035 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCRP04035 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HMGCRP04035 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCRP04035 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HMGCRP04035 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HMGCRP04035 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCRP04035 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCRP04035 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCRP04035 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCRP04035 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HMGCRP04035 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HMGCRP04035 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGCRP04035 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGCRP04035 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCRP04035 AC108725.1-201ENST00000495472 409 ntBASIC18.22■□□□□ 0.51
HMGCRP04035 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCRP04035 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCRP04035 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HMGCRP04035 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGCRP04035 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.22■□□□□ 0.51
HMGCRP04035 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCRP04035 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms