Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A1P02452 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A1P02452 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A1P02452 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.37■□□□□ 0.69
COL1A1P02452 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL1A1P02452 AC234783.1-201ENST00000441761 496 ntBASIC19.37■□□□□ 0.69
COL1A1P02452 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.37■□□□□ 0.69
COL1A1P02452 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.37■□□□□ 0.69
COL1A1P02452 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.37■□□□□ 0.69
COL1A1P02452 AC123567.1-201ENST00000548294 1261 ntBASIC19.37■□□□□ 0.69
COL1A1P02452 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.37■□□□□ 0.69
COL1A1P02452 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.37■□□□□ 0.69
COL1A1P02452 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
COL1A1P02452 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.37■□□□□ 0.69
COL1A1P02452 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.37■□□□□ 0.69
COL1A1P02452 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A1P02452 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A1P02452 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A1P02452 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A1P02452 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL1A1P02452 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.37■□□□□ 0.69
COL1A1P02452 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL1A1P02452 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A1P02452 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
COL1A1P02452 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A1P02452 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A1P02452 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A1P02452 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A1P02452 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A1P02452 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A1P02452 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A1P02452 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.36■□□□□ 0.69
COL1A1P02452 MYCLP2-201ENST00000449268 967 ntBASIC19.36■□□□□ 0.69
COL1A1P02452 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A1P02452 AC007389.4-201ENST00000454674 793 ntBASIC19.36■□□□□ 0.69
COL1A1P02452 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.36■□□□□ 0.69
COL1A1P02452 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A1P02452 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A1P02452 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.36■□□□□ 0.69
COL1A1P02452 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.36■□□□□ 0.69
COL1A1P02452 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A1P02452 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A1P02452 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A1P02452 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A1P02452 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A1P02452 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
COL1A1P02452 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A1P02452 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COL1A1P02452 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
COL1A1P02452 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A1P02452 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
COL1A1P02452 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.35■□□□□ 0.69
COL1A1P02452 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL1A1P02452 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
COL1A1P02452 MIR8072-201ENST00000614241 80 ntBASIC19.35■□□□□ 0.69
COL1A1P02452 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL1A1P02452 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A1P02452 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A1P02452 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A1P02452 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A1P02452 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
COL1A1P02452 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A1P02452 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.35■□□□□ 0.69
COL1A1P02452 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.35■□□□□ 0.69
COL1A1P02452 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.35■□□□□ 0.69
COL1A1P02452 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.35■□□□□ 0.69
COL1A1P02452 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.35■□□□□ 0.69
COL1A1P02452 AL033527.4-201ENST00000641026 673 ntBASIC19.35■□□□□ 0.69
COL1A1P02452 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.35■□□□□ 0.69
COL1A1P02452 AC092364.2-201ENST00000596710 2692 ntBASIC19.34■□□□□ 0.69
COL1A1P02452 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.34■□□□□ 0.69
COL1A1P02452 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.34■□□□□ 0.69
COL1A1P02452 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COL1A1P02452 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 AP001282.1-201ENST00000531301 1499 ntBASIC19.34■□□□□ 0.69
COL1A1P02452 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COL1A1P02452 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.34■□□□□ 0.69
COL1A1P02452 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.34■□□□□ 0.69
COL1A1P02452 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.34■□□□□ 0.69
COL1A1P02452 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COL1A1P02452 AP005482.1-201ENST00000563722 1273 ntBASIC19.34■□□□□ 0.69
COL1A1P02452 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL1A1P02452 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.34■□□□□ 0.69
COL1A1P02452 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.34■□□□□ 0.69
COL1A1P02452 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COL1A1P02452 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A1P02452 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL1A1P02452 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL1A1P02452 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL1A1P02452 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms