Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PPP1R3DO95685 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PPP1R3DO95685 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PPP1R3DO95685 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PPP1R3DO95685 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
PPP1R3DO95685 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PPP1R3DO95685 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PPP1R3DO95685 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PPP1R3DO95685 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PPP1R3DO95685 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.77□□□□□ -0.04
PPP1R3DO95685 MST1L-201ENST00000442552 2185 ntBASIC14.77□□□□□ -0.04
PPP1R3DO95685 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PPP1R3DO95685 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.77□□□□□ -0.04
PPP1R3DO95685 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PPP1R3DO95685 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PPP1R3DO95685 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PPP1R3DO95685 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.77□□□□□ -0.04
PPP1R3DO95685 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PPP1R3DO95685 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PPP1R3DO95685 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PPP1R3DO95685 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PPP1R3DO95685 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PPP1R3DO95685 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PPP1R3DO95685 AC108751.1-201ENST00000490852 363 ntBASIC14.77□□□□□ -0.05
PPP1R3DO95685 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PPP1R3DO95685 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PPP1R3DO95685 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 FAM215A-202ENST00000632077 792 ntBASIC14.77□□□□□ -0.05
PPP1R3DO95685 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PPP1R3DO95685 AC092384.3-202ENST00000564646 2873 ntBASIC14.77□□□□□ -0.05
PPP1R3DO95685 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PPP1R3DO95685 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PPP1R3DO95685 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PPP1R3DO95685 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 U82695.1-201ENST00000635752 1889 ntBASIC14.76□□□□□ -0.05
PPP1R3DO95685 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.76□□□□□ -0.05
PPP1R3DO95685 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 AC079781.3-201ENST00000449110 356 ntBASIC14.76□□□□□ -0.05
PPP1R3DO95685 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 AL513480.1-201ENST00000451731 511 ntBASIC14.76□□□□□ -0.05
PPP1R3DO95685 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.76□□□□□ -0.05
PPP1R3DO95685 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP1R3DO95685 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PPP1R3DO95685 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP1R3DO95685 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms