Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.69□□□□□ -0.38
PDE6DO43924 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
PDE6DO43924 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.69□□□□□ -0.38
PDE6DO43924 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
PDE6DO43924 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.69□□□□□ -0.38
PDE6DO43924 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
PDE6DO43924 GUSBP12-201ENST00000513727 720 ntBASIC12.69□□□□□ -0.38
PDE6DO43924 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.69□□□□□ -0.38
PDE6DO43924 TERC-201ENST00000602385 541 ntBASIC12.69□□□□□ -0.38
PDE6DO43924 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.69□□□□□ -0.38
PDE6DO43924 AC140113.3-201ENST00000605663 199 ntBASIC12.69□□□□□ -0.38
PDE6DO43924 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
PDE6DO43924 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
PDE6DO43924 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.69□□□□□ -0.38
PDE6DO43924 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.69□□□□□ -0.38
PDE6DO43924 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.69□□□□□ -0.38
PDE6DO43924 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.69□□□□□ -0.38
PDE6DO43924 AC232323.1-201ENST00000540724 2099 ntBASIC12.69□□□□□ -0.38
PDE6DO43924 REXO1L5P-201ENST00000622260 2098 ntBASIC12.69□□□□□ -0.38
PDE6DO43924 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.69□□□□□ -0.38
PDE6DO43924 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
PDE6DO43924 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
PDE6DO43924 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.69□□□□□ -0.38
PDE6DO43924 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
PDE6DO43924 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
PDE6DO43924 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.69□□□□□ -0.38
PDE6DO43924 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.69□□□□□ -0.38
PDE6DO43924 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PDE6DO43924 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.68□□□□□ -0.38
PDE6DO43924 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PDE6DO43924 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
PDE6DO43924 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 AC013726.1-201ENST00000563747 2285 ntBASIC12.68□□□□□ -0.38
PDE6DO43924 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.68□□□□□ -0.38
PDE6DO43924 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
PDE6DO43924 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
PDE6DO43924 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.68□□□□□ -0.38
PDE6DO43924 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.68□□□□□ -0.38
PDE6DO43924 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.68□□□□□ -0.38
PDE6DO43924 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
PDE6DO43924 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.68□□□□□ -0.38
PDE6DO43924 HLA-L-209ENST00000420110 1011 ntBASIC12.68□□□□□ -0.38
PDE6DO43924 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.68□□□□□ -0.38
PDE6DO43924 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.68□□□□□ -0.38
PDE6DO43924 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.68□□□□□ -0.38
PDE6DO43924 NAPSB-206ENST00000562112 1266 ntBASIC12.68□□□□□ -0.38
PDE6DO43924 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.68□□□□□ -0.38
PDE6DO43924 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 AL031432.5-201ENST00000641059 760 ntBASIC12.68□□□□□ -0.38
PDE6DO43924 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.68□□□□□ -0.38
PDE6DO43924 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
PDE6DO43924 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PDE6DO43924 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.68□□□□□ -0.38
PDE6DO43924 AP003680.1-201ENST00000598970 3660 ntBASIC12.68□□□□□ -0.38
PDE6DO43924 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
PDE6DO43924 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PDE6DO43924 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PDE6DO43924 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.68□□□□□ -0.38
PDE6DO43924 AC243591.1-201ENST00000452967 1364 ntBASIC12.68□□□□□ -0.38
PDE6DO43924 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.68□□□□□ -0.38
PDE6DO43924 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
PDE6DO43924 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 AL592424.1-201ENST00000563624 1536 ntBASIC12.67□□□□□ -0.38
PDE6DO43924 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 AL390755.1-201ENST00000623716 2027 ntBASIC12.67□□□□□ -0.38
PDE6DO43924 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms