Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 CEND1P1-201ENST00000451006 455 ntBASIC14.53□□□□□ -0.08
TRAF3IP2O43734 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 LINC01225-203ENST00000563550 1244 ntBASIC14.53□□□□□ -0.08
TRAF3IP2O43734 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 AL365330.1-201ENST00000607459 531 ntBASIC14.53□□□□□ -0.08
TRAF3IP2O43734 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.53□□□□□ -0.08
TRAF3IP2O43734 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 AC024909.3-201ENST00000611513 2257 ntBASIC14.52□□□□□ -0.08
TRAF3IP2O43734 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF3IP2O43734 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 MIR648-201ENST00000385046 94 ntBASIC14.52□□□□□ -0.09
TRAF3IP2O43734 RPSAP43-201ENST00000402237 625 ntBASIC14.52□□□□□ -0.09
TRAF3IP2O43734 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 AP000842.3-202ENST00000569238 1080 ntBASIC14.52□□□□□ -0.09
TRAF3IP2O43734 MIR4469-201ENST00000583919 79 ntBASIC14.52□□□□□ -0.09
TRAF3IP2O43734 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 AC023511.2-201ENST00000618803 211 ntBASIC14.52□□□□□ -0.09
TRAF3IP2O43734 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAF3IP2O43734 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AL603832.2-201ENST00000566195 2125 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms