Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.28■□□□□ 0.52
ACTN4O43707 AC002347.1-201ENST00000569543 541 ntBASIC18.28■□□□□ 0.52
ACTN4O43707 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.28■□□□□ 0.52
ACTN4O43707 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.28■□□□□ 0.52
ACTN4O43707 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.28■□□□□ 0.52
ACTN4O43707 AC068137.2-201ENST00000605408 478 ntBASIC18.28■□□□□ 0.52
ACTN4O43707 AC099522.2-201ENST00000607001 744 ntBASIC18.28■□□□□ 0.52
ACTN4O43707 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.28■□□□□ 0.52
ACTN4O43707 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ACTN4O43707 AC244517.3-201ENST00000616254 1235 ntBASIC18.28■□□□□ 0.52
ACTN4O43707 AC092865.6-201ENST00000642101 219 ntBASIC18.28■□□□□ 0.52
ACTN4O43707 WASH6P-202ENST00000359512 1437 ntBASIC18.28■□□□□ 0.52
ACTN4O43707 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ACTN4O43707 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
ACTN4O43707 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ACTN4O43707 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ACTN4O43707 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ACTN4O43707 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ACTN4O43707 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
ACTN4O43707 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ACTN4O43707 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ACTN4O43707 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
ACTN4O43707 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.27■□□□□ 0.52
ACTN4O43707 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ACTN4O43707 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ACTN4O43707 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.27■□□□□ 0.52
ACTN4O43707 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ACTN4O43707 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.27■□□□□ 0.52
ACTN4O43707 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ACTN4O43707 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ACTN4O43707 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.27■□□□□ 0.51
ACTN4O43707 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ACTN4O43707 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ACTN4O43707 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
ACTN4O43707 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.27■□□□□ 0.51
ACTN4O43707 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ACTN4O43707 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ACTN4O43707 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ACTN4O43707 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ACTN4O43707 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ACTN4O43707 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ACTN4O43707 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ACTN4O43707 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
ACTN4O43707 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ACTN4O43707 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACTN4O43707 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.26■□□□□ 0.51
ACTN4O43707 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.26■□□□□ 0.51
ACTN4O43707 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACTN4O43707 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
ACTN4O43707 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.26■□□□□ 0.51
ACTN4O43707 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACTN4O43707 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACTN4O43707 HAUS4P1-201ENST00000406739 1145 ntBASIC18.26■□□□□ 0.51
ACTN4O43707 AL590627.1-203ENST00000421194 1026 ntBASIC18.26■□□□□ 0.51
ACTN4O43707 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.26■□□□□ 0.51
ACTN4O43707 AC074386.1-202ENST00000463561 864 ntBASIC18.26■□□□□ 0.51
ACTN4O43707 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.26■□□□□ 0.51
ACTN4O43707 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.26■□□□□ 0.51
ACTN4O43707 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.26■□□□□ 0.51
ACTN4O43707 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.26■□□□□ 0.51
ACTN4O43707 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACTN4O43707 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.26■□□□□ 0.51
ACTN4O43707 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.26■□□□□ 0.51
ACTN4O43707 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.26■□□□□ 0.51
ACTN4O43707 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.26■□□□□ 0.51
ACTN4O43707 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ACTN4O43707 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACTN4O43707 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ACTN4O43707 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACTN4O43707 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACTN4O43707 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACTN4O43707 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.26■□□□□ 0.51
ACTN4O43707 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.26■□□□□ 0.51
ACTN4O43707 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.26■□□□□ 0.51
ACTN4O43707 PRAL-201ENST00000624952 3286 ntBASIC18.25■□□□□ 0.51
ACTN4O43707 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.25■□□□□ 0.51
ACTN4O43707 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 LINC00554-201ENST00000564841 3011 ntBASIC18.25■□□□□ 0.51
ACTN4O43707 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.25■□□□□ 0.51
ACTN4O43707 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
ACTN4O43707 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.25■□□□□ 0.51
ACTN4O43707 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ACTN4O43707 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ACTN4O43707 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.25■□□□□ 0.51
ACTN4O43707 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.25■□□□□ 0.51
ACTN4O43707 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.25■□□□□ 0.51
ACTN4O43707 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.25■□□□□ 0.51
ACTN4O43707 AC245100.5-201ENST00000452108 331 ntBASIC18.25■□□□□ 0.51
ACTN4O43707 PRYP6-201ENST00000514804 343 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms