Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 AC092171.3-201ENST00000610122 2651 ntBASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 TSPY16P-201ENST00000449843 468 ntBASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 COX20P2-201ENST00000452636 358 ntBASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 AC073389.1-201ENST00000595595 795 ntBASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 AC063926.3-201ENST00000624734 5658 ntBASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA3F8WFD2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 AL512652.2-201ENST00000625156 1716 ntBASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA3F8WFD2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 AC084018.2-201ENST00000613093 2607 ntBASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms