Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 RPS8P6-201ENST00000426177 609 ntBASIC14.39□□□□□ -0.11
NPIPB4C9JG80 DNAJB3-201ENST00000446806 729 ntBASIC14.39□□□□□ -0.11
NPIPB4C9JG80 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 AC055717.3-201ENST00000622967 595 ntBASIC14.39□□□□□ -0.11
NPIPB4C9JG80 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NPIPB4C9JG80 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 AC004987.2-201ENST00000395959 1148 ntBASIC14.38□□□□□ -0.11
NPIPB4C9JG80 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 HTR5BP-201ENST00000430851 1154 ntBASIC14.38□□□□□ -0.11
NPIPB4C9JG80 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 POLD2P1-201ENST00000511220 997 ntBASIC14.38□□□□□ -0.11
NPIPB4C9JG80 KRT8P48-201ENST00000515599 1220 ntBASIC14.38□□□□□ -0.11
NPIPB4C9JG80 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 AL691432.1-201ENST00000596308 1422 ntBASIC14.38□□□□□ -0.11
NPIPB4C9JG80 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NPIPB4C9JG80 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 ELL2P1-201ENST00000413990 1906 ntBASIC14.37□□□□□ -0.11
NPIPB4C9JG80 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 EEF1DP4-201ENST00000446006 880 ntBASIC14.37□□□□□ -0.11
NPIPB4C9JG80 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 YBX1P5-201ENST00000509441 847 ntBASIC14.37□□□□□ -0.11
NPIPB4C9JG80 IGHV3-62-201ENST00000520057 340 ntBASIC14.37□□□□□ -0.11
NPIPB4C9JG80 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms