Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.21□□□□□ -0.13
HMX3A6NHT5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMX3A6NHT5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMX3A6NHT5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMX3A6NHT5 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMX3A6NHT5 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMX3A6NHT5 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMX3A6NHT5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HMX3A6NHT5 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMX3A6NHT5 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMX3A6NHT5 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMX3A6NHT5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HMX3A6NHT5 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMX3A6NHT5 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
HMX3A6NHT5 PCDHA3-202ENST00000532566 4594 ntBASIC14.21□□□□□ -0.14
HMX3A6NHT5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HMX3A6NHT5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMX3A6NHT5 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.21□□□□□ -0.14
HMX3A6NHT5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMX3A6NHT5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
HMX3A6NHT5 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.21□□□□□ -0.14
HMX3A6NHT5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMX3A6NHT5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMX3A6NHT5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMX3A6NHT5 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 AL671710.1-201ENST00000610245 2349 ntBASIC14.2□□□□□ -0.14
HMX3A6NHT5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 KRT89P-201ENST00000620027 1478 ntBASIC14.2□□□□□ -0.14
HMX3A6NHT5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.2□□□□□ -0.14
HMX3A6NHT5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 AC112907.2-201ENST00000448639 330 ntBASIC14.2□□□□□ -0.14
HMX3A6NHT5 AC092647.4-201ENST00000457211 535 ntBASIC14.2□□□□□ -0.14
HMX3A6NHT5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 ZNF444P1-201ENST00000559497 298 ntBASIC14.2□□□□□ -0.14
HMX3A6NHT5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMX3A6NHT5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.2□□□□□ -0.14
HMX3A6NHT5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HMX3A6NHT5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.19□□□□□ -0.14
HMX3A6NHT5 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.19□□□□□ -0.14
HMX3A6NHT5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMX3A6NHT5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMX3A6NHT5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.19□□□□□ -0.14
HMX3A6NHT5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.19□□□□□ -0.14
HMX3A6NHT5 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMX3A6NHT5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.19□□□□□ -0.14
HMX3A6NHT5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HMX3A6NHT5 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMX3A6NHT5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMX3A6NHT5 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMX3A6NHT5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HMX3A6NHT5 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMX3A6NHT5 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMX3A6NHT5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMX3A6NHT5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMX3A6NHT5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HMX3A6NHT5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
HMX3A6NHT5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.19□□□□□ -0.14
HMX3A6NHT5 AC104076.2-201ENST00000448912 469 ntBASIC14.19□□□□□ -0.14
HMX3A6NHT5 AP003733.1-201ENST00000491725 852 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms