Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.76■■□□□ 1.07
SBNO1A3KN83 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 AC026954.1-201ENST00000429771 1293 ntBASIC21.75■■□□□ 1.07
SBNO1A3KN83 AC006033.1-201ENST00000440505 426 ntBASIC21.75■■□□□ 1.07
SBNO1A3KN83 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 AC010328.2-201ENST00000597698 1111 ntBASIC21.75■■□□□ 1.07
SBNO1A3KN83 AL049840.4-201ENST00000602422 811 ntBASIC21.75■■□□□ 1.07
SBNO1A3KN83 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC21.75■■□□□ 1.07
SBNO1A3KN83 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SBNO1A3KN83 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 TPO-206ENST00000382269 1155 ntTSL 5 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 AC106760.1-201ENST00000508690 800 ntBASIC21.74■■□□□ 1.07
SBNO1A3KN83 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 GNRHR2-203ENST00000581100 1187 ntBASIC21.74■■□□□ 1.07
SBNO1A3KN83 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 AC244669.2-201ENST00000612320 853 ntBASIC21.74■■□□□ 1.07
SBNO1A3KN83 RHOXF1P1-202ENST00000635473 501 ntBASIC21.74■■□□□ 1.07
SBNO1A3KN83 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 AC016694.1-201ENST00000434179 700 ntBASIC21.74■■□□□ 1.07
SBNO1A3KN83 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBNO1A3KN83 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 FAM86HP-204ENST00000513466 959 ntBASIC21.74■■□□□ 1.07
SBNO1A3KN83 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 AC005252.2-201ENST00000624630 1141 ntBASIC21.74■■□□□ 1.07
SBNO1A3KN83 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.74■■□□□ 1.07
SBNO1A3KN83 AC008687.7-202ENST00000637404 953 ntBASIC21.74■■□□□ 1.07
SBNO1A3KN83 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SBNO1A3KN83 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.73■■□□□ 1.07
SBNO1A3KN83 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms