Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 FAM86GP-201ENST00000448322 971 ntBASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 CICP6-201ENST00000457191 2729 ntBASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 Z92544.3-201ENST00000624747 417 ntBASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
PTPDC1A2A3K4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 AC010491.1-201ENST00000563101 2797 ntBASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 AC132872.4-202ENST00000622924 2756 ntBASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPDC1A2A3K4 AL592424.1-201ENST00000563624 1536 ntBASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 AC016027.1-202ENST00000607927 1699 ntBASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 RBPMS2P1-201ENST00000437762 623 ntBASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms