Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC009477.1-201ENST00000452936 217 ntBASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 PRYP6-201ENST00000514804 343 ntBASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGA9Q9Y5G4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 PCDHA1-201ENST00000378133 2726 ntBASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 LINC02199-201ENST00000506655 2702 ntBASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 AC087499.5-201ENST00000452760 1342 ntBASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 FAM220BP-201ENST00000377689 816 ntBASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 SLC25A1P3-201ENST00000395415 828 ntBASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGA9Q9Y5G4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms