Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 AD000864.1-201ENST00000624076 2295 ntBASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 AC002472.2-201ENST00000442739 958 ntBASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 RN7SL204P-201ENST00000582831 262 ntBASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 AC022144.1-201ENST00000602255 1580 ntBASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00588Q9Y4M8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
LINC00588Q9Y4M8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
LINC00588Q9Y4M8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.15□□□□□ -0.63
LINC00588Q9Y4M8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC11.15□□□□□ -0.63
LINC00588Q9Y4M8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
LINC00588Q9Y4M8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00588Q9Y4M8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00588Q9Y4M8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00588Q9Y4M8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
LINC00588Q9Y4M8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
LINC00588Q9Y4M8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00588Q9Y4M8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 AC011676.5-201ENST00000624864 2660 ntBASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 MIR661-201ENST00000384842 89 ntBASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 AL035633.1-201ENST00000406139 838 ntBASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 FAM207CP-201ENST00000443486 507 ntBASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 AL139010.1-201ENST00000454878 894 ntBASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 TERF1P3-201ENST00000505638 1227 ntBASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 LINC02560-201ENST00000596379 459 ntBASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms