Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC004890.2-204ENST00000481968 304 ntBASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 AC024267.1-201ENST00000582320 895 ntBASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 U82695.1-201ENST00000635752 1889 ntBASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 MIR4745-201ENST00000577608 62 ntBASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 DOC2GP-204ENST00000639052 2548 ntBASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 AL662844.4-201ENST00000606367 2838 ntBASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HMG20BQ9P0W2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 MRPS18AP1-201ENST00000414458 589 ntBASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 AC092364.2-201ENST00000596710 2692 ntBASIC19.78■□□□□ 0.76
HMG20BQ9P0W2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.77■□□□□ 0.76
HMG20BQ9P0W2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms