Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 AL020989.1-201ENST00000422979 469 ntBASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 AC096582.2-201ENST00000510860 516 ntBASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 AP005901.3-202ENST00000581653 237 ntBASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 AL121956.5-201ENST00000625261 221 ntBASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C12orf4Q9NQ89 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 AL365203.3-201ENST00000609742 2057 ntBASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 PMPCAP1-201ENST00000508114 1576 ntBASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 NUS1P1-201ENST00000446295 882 ntBASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 RN7SL850P-201ENST00000579959 291 ntBASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 AC233702.3-201ENST00000578656 1387 ntBASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
C12orf4Q9NQ89 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C12orf4Q9NQ89 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.29□□□□□ -0.12
C12orf4Q9NQ89 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.29□□□□□ -0.12
C12orf4Q9NQ89 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
C12orf4Q9NQ89 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.29□□□□□ -0.12
C12orf4Q9NQ89 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C12orf4Q9NQ89 INTS4P1-201ENST00000438455 1935 ntBASIC14.29□□□□□ -0.12
C12orf4Q9NQ89 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C12orf4Q9NQ89 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms