Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 KRT18P67-201ENST00000432816 1264 ntBASIC14.33□□□□□ -0.12
ELL3Q9HB65 AF186996.4-201ENST00000467186 377 ntBASIC14.33□□□□□ -0.12
ELL3Q9HB65 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 OR7E14P-202ENST00000530490 1290 ntBASIC14.33□□□□□ -0.12
ELL3Q9HB65 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 AL139011.1-202ENST00000642063 584 ntBASIC14.33□□□□□ -0.12
ELL3Q9HB65 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.33□□□□□ -0.12
ELL3Q9HB65 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 ELK2BP-201ENST00000415014 1224 ntBASIC14.32□□□□□ -0.12
ELL3Q9HB65 AC018712.1-201ENST00000455767 687 ntBASIC14.32□□□□□ -0.12
ELL3Q9HB65 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 AL160237.2-201ENST00000556165 472 ntBASIC14.32□□□□□ -0.12
ELL3Q9HB65 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 AL049840.3-201ENST00000602669 611 ntBASIC14.32□□□□□ -0.12
ELL3Q9HB65 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 AC007950.2-201ENST00000615045 2347 ntBASIC14.32□□□□□ -0.12
ELL3Q9HB65 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ELL3Q9HB65 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ELL3Q9HB65 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms