Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 PIN1P1-201ENST00000412108 996 ntBASIC17.52■□□□□ 0.4
NXF3Q9H4D5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.52■□□□□ 0.4
NXF3Q9H4D5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NXF3Q9H4D5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NXF3Q9H4D5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.52■□□□□ 0.39
NXF3Q9H4D5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NXF3Q9H4D5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NXF3Q9H4D5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.52■□□□□ 0.39
NXF3Q9H4D5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NXF3Q9H4D5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NXF3Q9H4D5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 SPDYE22P-201ENST00000582158 798 ntBASIC17.51■□□□□ 0.39
NXF3Q9H4D5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NXF3Q9H4D5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 BTBD7P1-201ENST00000447253 1453 ntBASIC17.5■□□□□ 0.39
NXF3Q9H4D5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 GNAQP1-201ENST00000444815 1067 ntBASIC17.5■□□□□ 0.39
NXF3Q9H4D5 AP005018.1-201ENST00000525475 301 ntBASIC17.5■□□□□ 0.39
NXF3Q9H4D5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 AL662799.1-202ENST00000614205 422 ntBASIC17.5■□□□□ 0.39
NXF3Q9H4D5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.5■□□□□ 0.39
NXF3Q9H4D5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms