Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 AL627223.1-201ENST00000416693 442 ntBASIC17.17■□□□□ 0.34
LHX5Q9H2C1 AC005237.2-201ENST00000434368 219 ntBASIC17.17■□□□□ 0.34
LHX5Q9H2C1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 AC093520.2-201ENST00000561830 333 ntBASIC17.17■□□□□ 0.34
LHX5Q9H2C1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 AC004835.2-201ENST00000603762 682 ntBASIC17.17■□□□□ 0.34
LHX5Q9H2C1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LHX5Q9H2C1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 AP3S2-216ENST00000617003 1561 ntBASIC17.16■□□□□ 0.34
LHX5Q9H2C1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 AL645939.2-201ENST00000427340 991 ntBASIC17.16■□□□□ 0.34
LHX5Q9H2C1 CYMP-203ENST00000474680 1263 ntBASIC17.16■□□□□ 0.34
LHX5Q9H2C1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 RNA5SP410-201ENST00000516285 106 ntBASIC17.16■□□□□ 0.34
LHX5Q9H2C1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LHX5Q9H2C1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms