Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 REXO1L8P-201ENST00000604378 1897 ntBASIC16.96■□□□□ 0.31
SIK2Q9H0K1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SIK2Q9H0K1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIK2Q9H0K1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIK2Q9H0K1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIK2Q9H0K1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIK2Q9H0K1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
SIK2Q9H0K1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIK2Q9H0K1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.96■□□□□ 0.3
SIK2Q9H0K1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIK2Q9H0K1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIK2Q9H0K1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SIK2Q9H0K1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIK2Q9H0K1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIK2Q9H0K1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 U82695.1-201ENST00000635752 1889 ntBASIC16.95■□□□□ 0.3
SIK2Q9H0K1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.95■□□□□ 0.3
SIK2Q9H0K1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.95■□□□□ 0.3
SIK2Q9H0K1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 AC009093.7-201ENST00000623853 1223 ntBASIC16.94■□□□□ 0.3
SIK2Q9H0K1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 AL589702.1-201ENST00000641229 1509 ntBASIC16.94■□□□□ 0.3
SIK2Q9H0K1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SIK2Q9H0K1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIK2Q9H0K1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms