Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 PRAL-201ENST00000624952 3286 ntBASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 SLC22A20-204ENST00000530038 1673 ntBASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COMMD4Q9H0A8 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 MTDHP3-201ENST00000594186 672 ntBASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 AC112504.1-201ENST00000623415 1841 ntBASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COMMD4Q9H0A8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.47□□□□□ -0.09
COMMD4Q9H0A8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms