Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 AL645608.8-201ENST00000606034 2086 ntBASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 MIR1908-201ENST00000410394 80 ntBASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 AL355994.2-201ENST00000447882 704 ntBASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 ENPP7P5-201ENST00000541031 1031 ntBASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 RNF165-205ENST00000588679 2904 ntBASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH11YQ9BZA8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 RPL13AP25-201ENST00000484130 612 ntBASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 SLED1-202ENST00000512051 380 ntBASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 PTP4A1P2-201ENST00000546033 454 ntBASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 TUBB1P2-201ENST00000422712 1306 ntBASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 TUBB1P1-201ENST00000503144 1300 ntBASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH11YQ9BZA8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDH11YQ9BZA8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH11YQ9BZA8 RNF216P1-203ENST00000404404 2427 ntBASIC20.85■□□□□ 0.93
PCDH11YQ9BZA8 AC009053.2-201ENST00000563701 2365 ntBASIC20.85■□□□□ 0.93
PCDH11YQ9BZA8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH11YQ9BZA8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH11YQ9BZA8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH11YQ9BZA8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms