Protein–RNA interactions for Protein: Q9BVV2

FNDC11, Fibronectin type III domain-containing protein 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC11Q9BVV2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FNDC11Q9BVV2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.15■□□□□ 0.02
FNDC11Q9BVV2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FNDC11Q9BVV2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
FNDC11Q9BVV2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FNDC11Q9BVV2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FNDC11Q9BVV2 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.15■□□□□ 0.02
FNDC11Q9BVV2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FNDC11Q9BVV2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.15■□□□□ 0.02
FNDC11Q9BVV2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 AC073621.1-201ENST00000392730 636 ntBASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 RPS2P1-201ENST00000434010 821 ntBASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 DUSP5P1-201ENST00000441325 1139 ntBASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 AC073648.2-201ENST00000510116 352 ntBASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 AC112504.1-201ENST00000623415 1841 ntBASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 AC011270.2-201ENST00000624293 2550 ntBASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FNDC11Q9BVV2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FNDC11Q9BVV2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FNDC11Q9BVV2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.12■□□□□ 0.01
FNDC11Q9BVV2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.12■□□□□ 0.01
FNDC11Q9BVV2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FNDC11Q9BVV2 AL592424.1-201ENST00000563624 1536 ntBASIC15.12■□□□□ 0.01
FNDC11Q9BVV2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FNDC11Q9BVV2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms