Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC016027.1-202ENST00000607927 1699 ntBASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 PMS2P4-201ENST00000412466 1052 ntBASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC108073.2-201ENST00000464002 357 ntBASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 OR7E47P-204ENST00000575924 449 ntBASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 CLEC4GP1-201ENST00000596555 870 ntBASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 IFNL4P1-201ENST00000607083 540 ntBASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC092919.2-201ENST00000623631 1645 ntBASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
SHANK2-AS3Q9BTD1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
SHANK2-AS3Q9BTD1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SHANK2-AS3Q9BTD1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SHANK2-AS3Q9BTD1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.58□□□□□ -0.39
SHANK2-AS3Q9BTD1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
SHANK2-AS3Q9BTD1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
SHANK2-AS3Q9BTD1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 HMGA1P7-201ENST00000406908 502 ntBASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.58□□□□□ -0.4
SHANK2-AS3Q9BTD1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms