Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.5□□□□□ -0.09
VRK1Q99986 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.5□□□□□ -0.09
VRK1Q99986 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.5□□□□□ -0.09
VRK1Q99986 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.5□□□□□ -0.09
VRK1Q99986 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.5□□□□□ -0.09
VRK1Q99986 MKNK2P1-201ENST00000437526 628 ntBASIC14.5□□□□□ -0.09
VRK1Q99986 SLC25A6P2-201ENST00000497974 877 ntBASIC14.5□□□□□ -0.09
VRK1Q99986 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.5□□□□□ -0.09
VRK1Q99986 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.5□□□□□ -0.09
VRK1Q99986 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.5□□□□□ -0.09
VRK1Q99986 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
VRK1Q99986 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.5□□□□□ -0.09
VRK1Q99986 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 DBET-201ENST00000630918 3363 ntBASIC14.5□□□□□ -0.09
VRK1Q99986 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VRK1Q99986 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.5□□□□□ -0.09
VRK1Q99986 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.5□□□□□ -0.09
VRK1Q99986 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VRK1Q99986 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VRK1Q99986 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.49□□□□□ -0.09
VRK1Q99986 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.49□□□□□ -0.09
VRK1Q99986 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.49□□□□□ -0.09
VRK1Q99986 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 ELL2P1-201ENST00000413990 1906 ntBASIC14.49□□□□□ -0.09
VRK1Q99986 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.49□□□□□ -0.09
VRK1Q99986 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VRK1Q99986 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 AC007326.2-201ENST00000624224 7579 ntBASIC14.49□□□□□ -0.09
VRK1Q99986 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
VRK1Q99986 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
VRK1Q99986 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.49□□□□□ -0.09
VRK1Q99986 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.49□□□□□ -0.09
VRK1Q99986 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
VRK1Q99986 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
VRK1Q99986 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 AC068137.2-201ENST00000605408 478 ntBASIC14.49□□□□□ -0.09
VRK1Q99986 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.49□□□□□ -0.09
VRK1Q99986 AC067930.6-201ENST00000623257 4947 ntBASIC14.49□□□□□ -0.09
VRK1Q99986 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 AC078925.2-201ENST00000624013 1973 ntBASIC14.49□□□□□ -0.09
VRK1Q99986 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.49□□□□□ -0.09
VRK1Q99986 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK1Q99986 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
VRK1Q99986 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.48□□□□□ -0.09
VRK1Q99986 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VRK1Q99986 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.48□□□□□ -0.09
VRK1Q99986 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms