Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CALR4P-201ENST00000431943 946 ntBASIC18.43■□□□□ 0.54
PTPN18Q99952 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PTPN18Q99952 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN18Q99952 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN18Q99952 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.43■□□□□ 0.54
PTPN18Q99952 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.43■□□□□ 0.54
PTPN18Q99952 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PTPN18Q99952 AP001063.1-201ENST00000568332 529 ntBASIC18.43■□□□□ 0.54
PTPN18Q99952 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.43■□□□□ 0.54
PTPN18Q99952 AC106872.11-201ENST00000605838 421 ntBASIC18.43■□□□□ 0.54
PTPN18Q99952 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.43■□□□□ 0.54
PTPN18Q99952 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.43■□□□□ 0.54
PTPN18Q99952 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN18Q99952 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN18Q99952 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTPN18Q99952 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN18Q99952 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN18Q99952 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN18Q99952 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PTPN18Q99952 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN18Q99952 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PTPN18Q99952 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PTPN18Q99952 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.42■□□□□ 0.54
PTPN18Q99952 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.42■□□□□ 0.54
PTPN18Q99952 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PTPN18Q99952 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.42■□□□□ 0.54
PTPN18Q99952 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.42■□□□□ 0.54
PTPN18Q99952 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.42■□□□□ 0.54
PTPN18Q99952 AP001258.2-201ENST00000529891 490 ntBASIC18.42■□□□□ 0.54
PTPN18Q99952 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.42■□□□□ 0.54
PTPN18Q99952 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.42■□□□□ 0.54
PTPN18Q99952 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.42■□□□□ 0.54
PTPN18Q99952 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.42■□□□□ 0.54
PTPN18Q99952 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN18Q99952 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.42■□□□□ 0.54
PTPN18Q99952 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN18Q99952 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN18Q99952 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.41■□□□□ 0.54
PTPN18Q99952 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN18Q99952 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 CNN2P8-201ENST00000421872 913 ntBASIC18.41■□□□□ 0.54
PTPN18Q99952 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN18Q99952 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.41■□□□□ 0.54
PTPN18Q99952 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.41■□□□□ 0.54
PTPN18Q99952 RPL13AP25-201ENST00000484130 612 ntBASIC18.41■□□□□ 0.54
PTPN18Q99952 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN18Q99952 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.41■□□□□ 0.54
PTPN18Q99952 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PTPN18Q99952 AL022328.3-201ENST00000607943 679 ntBASIC18.41■□□□□ 0.54
PTPN18Q99952 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.41■□□□□ 0.54
PTPN18Q99952 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PTPN18Q99952 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN18Q99952 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN18Q99952 LINC01144-201ENST00000626198 1710 ntBASIC18.4■□□□□ 0.54
PTPN18Q99952 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN18Q99952 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTPN18Q99952 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTPN18Q99952 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN18Q99952 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms