Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.75□□□□□ -0.37
TRGV9Q99603 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
TRGV9Q99603 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
TRGV9Q99603 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TRGV9Q99603 AC108073.2-201ENST00000464002 357 ntBASIC12.75□□□□□ -0.37
TRGV9Q99603 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.75□□□□□ -0.37
TRGV9Q99603 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.75□□□□□ -0.37
TRGV9Q99603 RNPS1P1-201ENST00000507437 918 ntBASIC12.75□□□□□ -0.37
TRGV9Q99603 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.75□□□□□ -0.37
TRGV9Q99603 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.75□□□□□ -0.37
TRGV9Q99603 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
TRGV9Q99603 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
TRGV9Q99603 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.75□□□□□ -0.37
TRGV9Q99603 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.75□□□□□ -0.37
TRGV9Q99603 AL031432.2-201ENST00000566714 459 ntBASIC12.75□□□□□ -0.37
TRGV9Q99603 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.75□□□□□ -0.37
TRGV9Q99603 AL928711.1-201ENST00000570165 459 ntBASIC12.75□□□□□ -0.37
TRGV9Q99603 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
TRGV9Q99603 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
TRGV9Q99603 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.75□□□□□ -0.37
TRGV9Q99603 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TRGV9Q99603 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.75□□□□□ -0.37
TRGV9Q99603 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.75□□□□□ -0.37
TRGV9Q99603 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 LINC00554-201ENST00000564841 3011 ntBASIC12.75□□□□□ -0.37
TRGV9Q99603 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TRGV9Q99603 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.75□□□□□ -0.37
TRGV9Q99603 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TRGV9Q99603 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.74□□□□□ -0.37
TRGV9Q99603 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.74□□□□□ -0.37
TRGV9Q99603 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
TRGV9Q99603 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.74□□□□□ -0.37
TRGV9Q99603 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 RPS2P28-201ENST00000314255 741 ntBASIC12.74□□□□□ -0.37
TRGV9Q99603 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 HAUS4P1-201ENST00000406739 1145 ntBASIC12.74□□□□□ -0.37
TRGV9Q99603 HMGA1P7-201ENST00000406908 502 ntBASIC12.74□□□□□ -0.37
TRGV9Q99603 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
TRGV9Q99603 AC245100.5-201ENST00000452108 331 ntBASIC12.74□□□□□ -0.37
TRGV9Q99603 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.74□□□□□ -0.37
TRGV9Q99603 CXCL1P1-201ENST00000502804 216 ntBASIC12.74□□□□□ -0.37
TRGV9Q99603 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.74□□□□□ -0.37
TRGV9Q99603 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 OR7E47P-204ENST00000575924 449 ntBASIC12.74□□□□□ -0.37
TRGV9Q99603 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TRGV9Q99603 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 CLEC4GP1-201ENST00000596555 870 ntBASIC12.74□□□□□ -0.37
TRGV9Q99603 AC004790.2-201ENST00000623588 572 ntBASIC12.74□□□□□ -0.37
TRGV9Q99603 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.74□□□□□ -0.37
TRGV9Q99603 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms