Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 AL033527.5-202ENST00000641632 1098 ntBASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 AL109936.8-201ENST00000641772 604 ntBASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 KRT8P12-202ENST00000472924 1397 ntBASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 LINC01144-201ENST00000626198 1710 ntBASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 AC244107.1-201ENST00000442033 332 ntBASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 AL589987.1-201ENST00000453380 819 ntBASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 AC027307.3-201ENST00000594262 1100 ntBASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85AQ96PX6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 COX5BP8-201ENST00000416911 349 ntBASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 NME2P1-201ENST00000426182 414 ntBASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 CHCHD2P3-201ENST00000603038 451 ntBASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 AC026979.3-201ENST00000607315 403 ntBASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85AQ96PX6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 AL139010.1-201ENST00000454878 894 ntBASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 DOC2GP-202ENST00000514950 1163 ntBASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 AC004461.2-201ENST00000629517 803 ntBASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC85AQ96PX6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms