Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MS4A4EQ96PG1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MS4A4EQ96PG1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MS4A4EQ96PG1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
MS4A4EQ96PG1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MS4A4EQ96PG1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MS4A4EQ96PG1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 AKAP8P1-201ENST00000434743 1349 ntBASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 AC245100.5-201ENST00000452108 331 ntBASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MS4A4EQ96PG1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 NFIC-211ENST00000641145 8399 ntBASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 FAM58CP-201ENST00000435741 640 ntBASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 RN7SL589P-201ENST00000481268 310 ntBASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms