Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.84■□□□□ 0.61
CDCA5Q96FF9 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA5Q96FF9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.84■□□□□ 0.61
CDCA5Q96FF9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.84■□□□□ 0.61
CDCA5Q96FF9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.84■□□□□ 0.61
CDCA5Q96FF9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA5Q96FF9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA5Q96FF9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA5Q96FF9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CDCA5Q96FF9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDCA5Q96FF9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDCA5Q96FF9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CDCA5Q96FF9 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDCA5Q96FF9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CDCA5Q96FF9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 TOMM22P5-201ENST00000416399 439 ntBASIC18.83■□□□□ 0.6
CDCA5Q96FF9 CALR4P-201ENST00000431943 946 ntBASIC18.83■□□□□ 0.6
CDCA5Q96FF9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 AP001258.2-201ENST00000529891 490 ntBASIC18.83■□□□□ 0.6
CDCA5Q96FF9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 AL022328.3-201ENST00000607943 679 ntBASIC18.83■□□□□ 0.6
CDCA5Q96FF9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA5Q96FF9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 GNRHR2-203ENST00000581100 1187 ntBASIC18.82■□□□□ 0.6
CDCA5Q96FF9 AC106872.11-201ENST00000605838 421 ntBASIC18.82■□□□□ 0.6
CDCA5Q96FF9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDCA5Q96FF9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 LINC01144-201ENST00000626198 1710 ntBASIC18.81■□□□□ 0.6
CDCA5Q96FF9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms