Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM12Q96EX1 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
SMIM12Q96EX1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM12Q96EX1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM12Q96EX1 AL023775.1-201ENST00000454907 1746 ntBASIC12.51□□□□□ -0.41
SMIM12Q96EX1 LINC01101-201ENST00000622953 1884 ntBASIC12.51□□□□□ -0.41
SMIM12Q96EX1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM12Q96EX1 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM12Q96EX1 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
SMIM12Q96EX1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 AL109954.1-202ENST00000564051 2148 ntBASIC12.5□□□□□ -0.41
SMIM12Q96EX1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 AC020765.3-201ENST00000613051 740 ntBASIC12.5□□□□□ -0.41
SMIM12Q96EX1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 AC007292.2-201ENST00000593524 1812 ntBASIC12.5□□□□□ -0.41
SMIM12Q96EX1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 OR2I1P-210ENST00000642037 4691 ntBASIC12.5□□□□□ -0.41
SMIM12Q96EX1 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM12Q96EX1 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM12Q96EX1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms