Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 MTND6P24-201ENST00000440466 518 ntBASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 AL079307.3-201ENST00000556114 283 ntBASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 AL138828.2-201ENST00000615812 383 ntBASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 CETN4P-206ENST00000642099 2168 ntBASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 MIR770-201ENST00000390219 98 ntBASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 AL080243.2-201ENST00000418783 582 ntBASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 AL691432.1-201ENST00000596308 1422 ntBASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 AL662844.4-201ENST00000606367 2838 ntBASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ECHDC3Q96DC8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 CYP4F24P-201ENST00000586049 1580 ntBASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 RPL37AP1-201ENST00000412502 279 ntBASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 HMGN1P19-201ENST00000436976 333 ntBASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 AL589739.1-201ENST00000607720 493 ntBASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms