Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 KRT18P64-201ENST00000434946 1219 ntBASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 VDAC1P7-201ENST00000462417 847 ntBASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 RPL13AP25-201ENST00000484130 612 ntBASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 AP001063.1-201ENST00000568332 529 ntBASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 GNRHR2-203ENST00000581100 1187 ntBASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 AL691432.1-201ENST00000596308 1422 ntBASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 EEF1DP4-201ENST00000446006 880 ntBASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 ACTG1P17-201ENST00000558391 1119 ntBASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 AC016629.1-201ENST00000596579 586 ntBASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRIM43Q96BQ3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 AC004987.2-201ENST00000395959 1148 ntBASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 TOMM22P5-201ENST00000416399 439 ntBASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms