Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 AC055717.3-201ENST00000622967 595 ntBASIC14.35□□□□□ -0.11
TMEM54Q969K7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 AC211486.1-202ENST00000416371 468 ntBASIC14.34□□□□□ -0.11
TMEM54Q969K7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 AC211476.1-201ENST00000503899 468 ntBASIC14.34□□□□□ -0.11
TMEM54Q969K7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 AP3S2-216ENST00000617003 1561 ntBASIC14.34□□□□□ -0.11
TMEM54Q969K7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM54Q969K7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM54Q969K7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM54Q969K7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM54Q969K7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM54Q969K7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM54Q969K7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM54Q969K7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TMEM54Q969K7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
TMEM54Q969K7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM54Q969K7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM54Q969K7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
TMEM54Q969K7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM54Q969K7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM54Q969K7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM54Q969K7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM54Q969K7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM54Q969K7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 AL627223.1-201ENST00000416693 442 ntBASIC14.33□□□□□ -0.12
TMEM54Q969K7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM54Q969K7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 AC093520.2-201ENST00000561830 333 ntBASIC14.33□□□□□ -0.12
TMEM54Q969K7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.33□□□□□ -0.12
TMEM54Q969K7 AC004835.2-201ENST00000603762 682 ntBASIC14.33□□□□□ -0.12
TMEM54Q969K7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM54Q969K7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms