Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 ALG1L8P-201ENST00000533887 760 ntBASIC17.23■□□□□ 0.35
ATP2A3Q93084 AC140878.1-201ENST00000565277 250 ntBASIC17.23■□□□□ 0.35
ATP2A3Q93084 CYP2A7P1-201ENST00000595391 815 ntBASIC17.23■□□□□ 0.35
ATP2A3Q93084 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.22■□□□□ 0.35
ATP2A3Q93084 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 MIR6080-201ENST00000617359 66 ntBASIC17.22■□□□□ 0.35
ATP2A3Q93084 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 AC079328.2-201ENST00000561241 3354 ntBASIC17.22■□□□□ 0.35
ATP2A3Q93084 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 AC008677.1-201ENST00000519230 1561 ntBASIC17.22■□□□□ 0.35
ATP2A3Q93084 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 AC078925.2-201ENST00000624013 1973 ntBASIC17.22■□□□□ 0.35
ATP2A3Q93084 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ATP2A3Q93084 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A3Q93084 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 MIR346-201ENST00000362234 95 ntBASIC17.21■□□□□ 0.35
ATP2A3Q93084 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A3Q93084 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2A3Q93084 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.21■□□□□ 0.34
ATP2A3Q93084 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.21■□□□□ 0.34
ATP2A3Q93084 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms