Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC096582.2-201ENST00000510860 516 ntBASIC15.05■□□□□ -0
HPS1Q92902 AC079776.4-201ENST00000511039 504 ntBASIC15.05■□□□□ -0
HPS1Q92902 AF238378.1-201ENST00000526806 358 ntBASIC15.05■□□□□ -0
HPS1Q92902 AC009533.2-201ENST00000543664 586 ntBASIC15.05■□□□□ -0
HPS1Q92902 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.05■□□□□ -0
HPS1Q92902 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.05■□□□□ -0
HPS1Q92902 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.05■□□□□ -0
HPS1Q92902 LINC01451-201ENST00000623792 534 ntBASIC15.05■□□□□ -0
HPS1Q92902 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.05■□□□□ -0
HPS1Q92902 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
HPS1Q92902 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HPS1Q92902 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
HPS1Q92902 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
HPS1Q92902 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.05■□□□□ -0
HPS1Q92902 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HPS1Q92902 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HPS1Q92902 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 AC005089.1-201ENST00000619486 2241 ntBASIC15.04■□□□□ -0
HPS1Q92902 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.04■□□□□ -0
HPS1Q92902 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 GRK6P1-201ENST00000400595 1711 ntBASIC15.04■□□□□ -0
HPS1Q92902 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.04■□□□□ -0
HPS1Q92902 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HPS1Q92902 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.04■□□□□ -0
HPS1Q92902 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 AC097374.2-201ENST00000618617 1306 ntBASIC15.04■□□□□ -0
HPS1Q92902 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
HPS1Q92902 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.04■□□□□ -0
HPS1Q92902 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 DDX43P3-201ENST00000441064 443 ntBASIC15.04■□□□□ -0
HPS1Q92902 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.04■□□□□ -0
HPS1Q92902 AF186996.4-201ENST00000467186 377 ntBASIC15.04■□□□□ -0
HPS1Q92902 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.04■□□□□ -0
HPS1Q92902 AP001005.1-201ENST00000571755 1248 ntBASIC15.04■□□□□ -0
HPS1Q92902 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.04■□□□□ -0
HPS1Q92902 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.04■□□□□ -0
HPS1Q92902 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.04■□□□□ -0
HPS1Q92902 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 AL773604.1-201ENST00000617417 272 ntBASIC15.04■□□□□ -0
HPS1Q92902 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HPS1Q92902 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
HPS1Q92902 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.04■□□□□ -0
HPS1Q92902 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.04■□□□□ -0
HPS1Q92902 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.03■□□□□ -0
HPS1Q92902 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HPS1Q92902 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HPS1Q92902 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HPS1Q92902 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HPS1Q92902 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HPS1Q92902 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HPS1Q92902 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HPS1Q92902 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.03■□□□□ -0
HPS1Q92902 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
HPS1Q92902 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HPS1Q92902 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.03■□□□□ -0
HPS1Q92902 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HPS1Q92902 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms