Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 AL049840.4-201ENST00000602422 811 ntBASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 Six3os1_5.1-201ENST00000611000 271 ntBASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CASKIN1Q8WXD9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 AL359711.2-201ENST00000563105 872 ntBASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 AC233724.13-201ENST00000598383 410 ntBASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 AC018665.1-201ENST00000622927 1362 ntBASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASKIN1Q8WXD9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 AL607033.1-201ENST00000623900 1599 ntBASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASKIN1Q8WXD9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 MIR648-201ENST00000385046 94 ntBASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 AC234783.1-201ENST00000441761 496 ntBASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 AC120045.2-201ENST00000567334 178 ntBASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC24.89■■□□□ 1.58
CASKIN1Q8WXD9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CASKIN1Q8WXD9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CASKIN1Q8WXD9 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC24.89■■□□□ 1.57
CASKIN1Q8WXD9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CASKIN1Q8WXD9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CASKIN1Q8WXD9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CASKIN1Q8WXD9 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.57
CASKIN1Q8WXD9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC24.89■■□□□ 1.57
CASKIN1Q8WXD9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms