Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 PTCHD3P3-201ENST00000403073 906 ntBASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 KRT18P27-201ENST00000427733 1299 ntBASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AC008735.5-201ENST00000623544 497 ntBASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AL805961.1-202ENST00000641562 540 ntBASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AF228730.7-201ENST00000641842 219 ntBASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AL512652.2-201ENST00000625156 1716 ntBASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 AL031731.1-201ENST00000642131 2094 ntBASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 PRAL-201ENST00000624952 3286 ntBASIC13.81□□□□□ -0.2
RTN4IP1Q8WWV3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 AC073347.1-201ENST00000421633 2643 ntBASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 AP002414.2-201ENST00000591780 3365 ntBASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 TPM4P1-201ENST00000436100 807 ntBASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 HNRNPDP1-201ENST00000439535 754 ntBASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 PAWRP1-201ENST00000451083 565 ntBASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 AC136632.2-201ENST00000512891 861 ntBASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 AL160237.2-201ENST00000556165 472 ntBASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 MIR1199-201ENST00000621445 119 ntBASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 PI4KAP1-204ENST00000612579 1703 ntBASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 AC022532.1-201ENST00000624563 1728 ntBASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms