Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 AL359258.3-201ENST00000622910 2331 ntBASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 AC105250.1-201ENST00000509378 2057 ntBASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 AC092647.4-201ENST00000457211 535 ntBASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 AC087163.2-201ENST00000457299 853 ntBASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 AC096582.2-201ENST00000510860 516 ntBASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKAP2Q8WWK9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 AC007191.1-201ENST00000623179 2995 ntBASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 AC091951.1-201ENST00000512854 2465 ntBASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 AC026396.1-201ENST00000419388 421 ntBASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 PRYP5-201ENST00000451909 266 ntBASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 AC112693.3-201ENST00000624819 1983 ntBASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
CKAP2Q8WWK9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 LINC00528-201ENST00000600723 2160 ntBASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 AK4P3-201ENST00000418260 669 ntBASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CKAP2Q8WWK9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 315.7 ms