Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.3□□□□□ -0.12
CSNK2A3Q8NEV1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CSNK2A3Q8NEV1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK2A3Q8NEV1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.3□□□□□ -0.12
CSNK2A3Q8NEV1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK2A3Q8NEV1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CSNK2A3Q8NEV1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK2A3Q8NEV1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK2A3Q8NEV1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK2A3Q8NEV1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.3□□□□□ -0.12
CSNK2A3Q8NEV1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK2A3Q8NEV1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 PMS2P4-201ENST00000412466 1052 ntBASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 AC096734.2-201ENST00000562054 433 ntBASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 AC007064.4-201ENST00000637740 555 ntBASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 HLA-A-201ENST00000376802 1334 ntBASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 MTHFR-217ENST00000641820 1569 ntBASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 AL161772.1-201ENST00000610494 4412 ntBASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK2A3Q8NEV1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 HCG4B-203ENST00000450128 991 ntBASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 AC009078.2-202ENST00000463353 338 ntBASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.28□□□□□ -0.12
CSNK2A3Q8NEV1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms